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Computational methods and vibrational
properties applied to materials modeling
Dr. Federico Brivio
Workshop BTHA - March 26, 2019
.Raffaello Sanzio - La scuola di Atene
1
Material Simulation
Solve theoretical equation to
predict Material Properties
(often) Cheaper, safer,
cleaner, faster, ...
|
2
Computer evolution
top500.org
Exponential growth
Limit Moore’s law
Better description
New type of simulations
|
3
Material Design
Stage I (Past):
Reproduction of specific cases
Few "home-brew" software
Stage II (Today):
Prediction of Properties of materials
Accessible/commercial software
Stage III (Future):
Prediction of Materials with specific
properties
Network, cloud, data-mining
REAL material design
|
4
Material Design
Stage I (Past):
Reproduction of specific cases
Few "home-brew" software
Stage II (Today):
Prediction of Properties of materials
Accessible/commercial software
Stage III (Future):
Prediction of Materials with specific
properties
Network, cloud, data-mining
REAL material design
|
5
DFT in pills
GROUND-STATE energy and density of the electronic system
Function of e−
n(r) coordinates. Nuclei are parameters
(Born-Oppenheimer)
A-Thermal, slightly different from 0 K.
Zero-Point-Energy missing
Static picture, different statistics, ...
DFT is a exact-theory, but it has an "imperfect" implementation:
Exchange-correlation functional unknown (accuracy)
Numerical noise (precision)[1, 2]
|
6
DFT Errors vs Experiment
Accuracy
Taken from [2].
Accuracy is independent from PRECISION. All the calculation has to
be converged against the parameters of interest.
Minimization of NOISE.
|
7
Beyond DFT
We can intrinsically improve DFT:
Electronic description: GW, post-HF, TD-DFT, ...
We can obtain Dynamics from Thermodynamic:
Jacob’s Ladder of Phonons:
Phonon - Harmonic app. (Q2
)
Quasi-Harmonic
approximation (Q2
)
Phonon-Phonon scattering
Anharmonic (Q3
)
Anharmonicity++ (Q4
, ...)
G. Doré|
8
Phonon
Phonon:Quasi-particle: coordinate collective motions of atoms that is
described in a single particle formalism: momentum, energy.
Molecular Vibrations:
Molecules atom forms normal
modes.
Real space coordinates.
Crystal Vibrations:
The vibrations have a phase
component.
Brillouin space: Dispersion
curves, similar to e−
band
structure
|
9
Harmonic model
Easier approach is the Harmonic approach based on Hooke’s law.
F = −kx
U = 1
2 kx2
Pros:
Analytic solution
Good description of many
properties
Limits:
Immortal modes
Non-physical (lack of thermal
expansion and other
anharmonic effects)
|
10
3D Harmonic Crystal
The harmonic model can be applied to a classic system and to a
quantum oscillator (QO) model (discrete solutions). The QO model
can be extended to periodic systems:
Periodic potential
Solutions are planewaves
Pair-Forces Dij(R − R ) = ∂2
U
∂ui(R)∂uj (R)
Dynamical matrix D(k) = R D(R)eik·R
Mω2
= D(k)
us(R, t) = Re[ s(k)ei(k·R−ωs(k)t)
]
|
11
Finited Displacement Method
GOAL: Calculate D(R) force matrix.
Molecules have 3N-3 DOF. Starting from a converged structure (no
forces acting on atoms):
1. Symmetry analysis
2. Displace every atom
3. Collection of Forces
4. Dynamical Matrix and phonon
properties
5. Eventual correction
|
12
Phonon dispersion
If we apply the FDM to a large supercell, we can extract information
on the whole Brillouin space.
|
13
Phonon dispersion
The vibration could originate local long-range polarization, then it is
necessary to apply an analytical correction.
|
14
Phonon Density of States
From the Phonon dispersion it is possible to obtain the Density of
vibrational States.
|
15
Spectra
From the frequency at Gamma it is possible to obtain IR and Raman
Spectra:
Symmetry analysis for
selection rule
Polarizability variation ∂α/∂Q
Raman
Polarization (BEC) IR
|
16
MAPI - approach to complex materials
|
17
Results - MAPI phases
|
18
Thermal properties
We can introduce T with basic thermodynamics at fixed volume,
harmonic regime:
n = 1
exp( ω(qν)/kBT )−1
E = qν ω(qν) 1
2 + 1
exp( ω(qν)/kBT )−1
Z = exp(−ϕ/kBT) qν
exp(− ω(qν)/2kBT )
1−exp(− ω(qν)/kBT )
F = −kBT ln Z
S = −∂F
∂T
|
19
Example Silicon
Specific heat at constant V: CV = ∂E/∂T
|
20
Anharmonicity
Thermal expansion can not happen in harmonic regime and generally
we work in a constant P environment.
Quasi-Harmonic-Approximation (QHA) consist in a set of harmonic
phonon calculations at different constrained volumes.
|
21
Anharmonicity
The calculation for QHA requires different set of basic phonon
calculation.
This typically makes calculation 5 times more expensive.
|
22
QHA - Al
G(T, p) = minV [U(V ) + Fphonon(T; V ) + pV ] This give access to the
full spectra of thermodynamic quantities:
Bulk modulus (GPa) EOS
Gibbs free energy (eV) vs T
Volumetric expansion
Cp as −T∂2
G/∂T2
Cp from Maxwell relations
F vs V
|
23
Grüneisen - Si
The anharmonicity of the system is caught by the Grüneisen
parameter that express how the vibrations change in function of the
Temperature.
γ = V
dP
dE V
=
αKT
CV ρ
=
αKS
CP ρ
=
αv2
s
CP
|
24
QHA - cubic MAPI
|
25
Higher order anharmonicity
The QHA is still an harmonic theory[3]. To go beyond we need to
include phonon-phonon scattering. The cost of calculations goes as
( ˆN)2
Lattice thermal conductivity
Phonon lifetime/linewidth
Imaginary part of self energy
Joint density of states (JDOS)
and weighted-JDOS
|
26
Bibliography
[1] Min-Cheol Kim, Eunji Sim, and Kieron Burke. “Understanding and reducing errors in density functional calculations”. In: Physical
review letters 111.7 (2013), page 073003.
[2] Kurt Lejaeghere, Veronique Van Speybroeck, Guido Van Oost, and Stefaan Cottenier. “Error estimates for solid-state
density-functional theory predictions: an overview by means of the ground-state elemental crystals”. In: Critical Reviews in Solid
State and Materials Sciences 39.1 (2014), pages 1–24.
[3] Atsushi Togo, Laurent Chaput, and Isao Tanaka. “Distributions of phonon lifetimes in Brillouin zones”. In: Physical Review B 91.9
(2015), page 094306.
|
27
Acknowledgement
Thank you for your attention! I also want to thanks:
- Prof. Nachtigall and the whole research group
- EU- European structural and investing funds and the MSMT
- Dr. Jonathan Skelton
|
28
Soft Modes
If the system is not STABLE, vibration can DECREASE the energy!
∆E = 1
2 mω2
x < 0 → ω ∈ C
This is the fingerprint for a phase transition. During a PT, the T lowers
the energy of a vibrations, until that becomes negative and triggers
the rearrangement of atoms!
[doi:10.1007/s100510070248]
|
29
It’s always the k-space
DFT potential depends on the k-point sampling.
Phonon potential is Harmonic! k-dependence is a FT! Supercell are
improving the force description.
Gamma soft mode = Unstable phase
Off-Gamma = Phase modulation -
need of a new unit cell
[10.1103/PhysRevB.91.144107]
|
30
T spectra
Double set QHA can obtain properties at different V, hence T.
0 20 40 60 80 100
VibrationalDOS[a.u.]
Frequency [THz]
Compound 3 - Space group C2221
0 K
50 K
150 K
350 K
500 K
|
31
T spectra
|
32
Higher order anharmonicity
The QHA is still an harmonic theory[3]. To go beyond we need to
include phonon-phonon scattering. The cost of calculations goes as
( ˆN)2
Lattice thermal conductivity
Phonon lifetime/linewidth
Imaginary part of self energy
Joint density of states (JDOS)
and weighted-JDOS
|
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Computational methods and vibrational properties applied to materials modeling

  • 1. Computational methods and vibrational properties applied to materials modeling Dr. Federico Brivio Workshop BTHA - March 26, 2019 .Raffaello Sanzio - La scuola di Atene
  • 2. 1 Material Simulation Solve theoretical equation to predict Material Properties (often) Cheaper, safer, cleaner, faster, ... |
  • 3. 2 Computer evolution top500.org Exponential growth Limit Moore’s law Better description New type of simulations |
  • 4. 3 Material Design Stage I (Past): Reproduction of specific cases Few "home-brew" software Stage II (Today): Prediction of Properties of materials Accessible/commercial software Stage III (Future): Prediction of Materials with specific properties Network, cloud, data-mining REAL material design |
  • 5. 4 Material Design Stage I (Past): Reproduction of specific cases Few "home-brew" software Stage II (Today): Prediction of Properties of materials Accessible/commercial software Stage III (Future): Prediction of Materials with specific properties Network, cloud, data-mining REAL material design |
  • 6. 5 DFT in pills GROUND-STATE energy and density of the electronic system Function of e− n(r) coordinates. Nuclei are parameters (Born-Oppenheimer) A-Thermal, slightly different from 0 K. Zero-Point-Energy missing Static picture, different statistics, ... DFT is a exact-theory, but it has an "imperfect" implementation: Exchange-correlation functional unknown (accuracy) Numerical noise (precision)[1, 2] |
  • 7. 6 DFT Errors vs Experiment Accuracy Taken from [2]. Accuracy is independent from PRECISION. All the calculation has to be converged against the parameters of interest. Minimization of NOISE. |
  • 8. 7 Beyond DFT We can intrinsically improve DFT: Electronic description: GW, post-HF, TD-DFT, ... We can obtain Dynamics from Thermodynamic: Jacob’s Ladder of Phonons: Phonon - Harmonic app. (Q2 ) Quasi-Harmonic approximation (Q2 ) Phonon-Phonon scattering Anharmonic (Q3 ) Anharmonicity++ (Q4 , ...) G. Doré|
  • 9. 8 Phonon Phonon:Quasi-particle: coordinate collective motions of atoms that is described in a single particle formalism: momentum, energy. Molecular Vibrations: Molecules atom forms normal modes. Real space coordinates. Crystal Vibrations: The vibrations have a phase component. Brillouin space: Dispersion curves, similar to e− band structure |
  • 10. 9 Harmonic model Easier approach is the Harmonic approach based on Hooke’s law. F = −kx U = 1 2 kx2 Pros: Analytic solution Good description of many properties Limits: Immortal modes Non-physical (lack of thermal expansion and other anharmonic effects) |
  • 11. 10 3D Harmonic Crystal The harmonic model can be applied to a classic system and to a quantum oscillator (QO) model (discrete solutions). The QO model can be extended to periodic systems: Periodic potential Solutions are planewaves Pair-Forces Dij(R − R ) = ∂2 U ∂ui(R)∂uj (R) Dynamical matrix D(k) = R D(R)eik·R Mω2 = D(k) us(R, t) = Re[ s(k)ei(k·R−ωs(k)t) ] |
  • 12. 11 Finited Displacement Method GOAL: Calculate D(R) force matrix. Molecules have 3N-3 DOF. Starting from a converged structure (no forces acting on atoms): 1. Symmetry analysis 2. Displace every atom 3. Collection of Forces 4. Dynamical Matrix and phonon properties 5. Eventual correction |
  • 13. 12 Phonon dispersion If we apply the FDM to a large supercell, we can extract information on the whole Brillouin space. |
  • 14. 13 Phonon dispersion The vibration could originate local long-range polarization, then it is necessary to apply an analytical correction. |
  • 15. 14 Phonon Density of States From the Phonon dispersion it is possible to obtain the Density of vibrational States. |
  • 16. 15 Spectra From the frequency at Gamma it is possible to obtain IR and Raman Spectra: Symmetry analysis for selection rule Polarizability variation ∂α/∂Q Raman Polarization (BEC) IR |
  • 17. 16 MAPI - approach to complex materials |
  • 18. 17 Results - MAPI phases |
  • 19. 18 Thermal properties We can introduce T with basic thermodynamics at fixed volume, harmonic regime: n = 1 exp( ω(qν)/kBT )−1 E = qν ω(qν) 1 2 + 1 exp( ω(qν)/kBT )−1 Z = exp(−ϕ/kBT) qν exp(− ω(qν)/2kBT ) 1−exp(− ω(qν)/kBT ) F = −kBT ln Z S = −∂F ∂T |
  • 20. 19 Example Silicon Specific heat at constant V: CV = ∂E/∂T |
  • 21. 20 Anharmonicity Thermal expansion can not happen in harmonic regime and generally we work in a constant P environment. Quasi-Harmonic-Approximation (QHA) consist in a set of harmonic phonon calculations at different constrained volumes. |
  • 22. 21 Anharmonicity The calculation for QHA requires different set of basic phonon calculation. This typically makes calculation 5 times more expensive. |
  • 23. 22 QHA - Al G(T, p) = minV [U(V ) + Fphonon(T; V ) + pV ] This give access to the full spectra of thermodynamic quantities: Bulk modulus (GPa) EOS Gibbs free energy (eV) vs T Volumetric expansion Cp as −T∂2 G/∂T2 Cp from Maxwell relations F vs V |
  • 24. 23 Grüneisen - Si The anharmonicity of the system is caught by the Grüneisen parameter that express how the vibrations change in function of the Temperature. γ = V dP dE V = αKT CV ρ = αKS CP ρ = αv2 s CP |
  • 25. 24 QHA - cubic MAPI |
  • 26. 25 Higher order anharmonicity The QHA is still an harmonic theory[3]. To go beyond we need to include phonon-phonon scattering. The cost of calculations goes as ( ˆN)2 Lattice thermal conductivity Phonon lifetime/linewidth Imaginary part of self energy Joint density of states (JDOS) and weighted-JDOS |
  • 27. 26 Bibliography [1] Min-Cheol Kim, Eunji Sim, and Kieron Burke. “Understanding and reducing errors in density functional calculations”. In: Physical review letters 111.7 (2013), page 073003. [2] Kurt Lejaeghere, Veronique Van Speybroeck, Guido Van Oost, and Stefaan Cottenier. “Error estimates for solid-state density-functional theory predictions: an overview by means of the ground-state elemental crystals”. In: Critical Reviews in Solid State and Materials Sciences 39.1 (2014), pages 1–24. [3] Atsushi Togo, Laurent Chaput, and Isao Tanaka. “Distributions of phonon lifetimes in Brillouin zones”. In: Physical Review B 91.9 (2015), page 094306. |
  • 28. 27 Acknowledgement Thank you for your attention! I also want to thanks: - Prof. Nachtigall and the whole research group - EU- European structural and investing funds and the MSMT - Dr. Jonathan Skelton |
  • 29. 28 Soft Modes If the system is not STABLE, vibration can DECREASE the energy! ∆E = 1 2 mω2 x < 0 → ω ∈ C This is the fingerprint for a phase transition. During a PT, the T lowers the energy of a vibrations, until that becomes negative and triggers the rearrangement of atoms! [doi:10.1007/s100510070248] |
  • 30. 29 It’s always the k-space DFT potential depends on the k-point sampling. Phonon potential is Harmonic! k-dependence is a FT! Supercell are improving the force description. Gamma soft mode = Unstable phase Off-Gamma = Phase modulation - need of a new unit cell [10.1103/PhysRevB.91.144107] |
  • 31. 30 T spectra Double set QHA can obtain properties at different V, hence T. 0 20 40 60 80 100 VibrationalDOS[a.u.] Frequency [THz] Compound 3 - Space group C2221 0 K 50 K 150 K 350 K 500 K |
  • 33. 32 Higher order anharmonicity The QHA is still an harmonic theory[3]. To go beyond we need to include phonon-phonon scattering. The cost of calculations goes as ( ˆN)2 Lattice thermal conductivity Phonon lifetime/linewidth Imaginary part of self energy Joint density of states (JDOS) and weighted-JDOS |
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